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Author Correction: The evolution of lung cancer and impact of subclonal selection in TRACERx

Alexander M. Frankell
Michelle Dietzen
Maise Al Bakir
Emilia L. Lim
Takahiro Karasaki
Sophia Ward
Selvaraju Veeriah
Emma Colliver
Ariana Huebner
Abigail Bunkum
Mark S. Hill
Kristiana Grigoriadis
David A. Moore
James R. M. Black
Wing Kin Liu
Kerstin Thol
Oriol Pich
Thomas B. K. Watkins
Cristina Naceur-Lombardelli
Daniel E. Cook
Roberto Salgado
Gareth A. Wilson
Chris Bailey
Mihaela Angelova
Robert Bentham
Carlos Martínez-Ruiz
Christopher Abbosh
Andrew G. Nicholson
John Le Quesne
Dhruva Biswas
Rachel Rosenthal
Clare Puttick
Sonya Hessey
Claudia Lee
Paulina Prymas
Antonia Toncheva
Jon Smith
Wei Xing
Jerome Nicod
Gillian Price
Keith M. Kerr
Babu Naidu
Gary Middleton
Kevin G. Blyth
Dean A. Fennell
Martin D. Forster
Siow Ming Lee
Mary Falzon
Madeleine Hewish
Michael J. Shackcloth
Eric Lim
Sarah Benafif
Peter Russell
Ekaterini Boleti
Matthew G. Krebs
Jason F. Lester
Dionysis Papadatos-Pastos
Tanya Ahmad
Ricky M. Thakrar
David Lawrence
Neal Navani
Sam M. Janes
Caroline Dive
Fiona H. Blackhall
Yvonne Summers
Judith Cave
Teresa Marafioti
Javier Herrero
Sergio A. Quezada
Karl S. Peggs
Roland F. Schwarz
Peter Van Loo
Daniël M. Miedema
Nicolai J. Birkbak
Crispin T. Hiley
Allan Hackshaw
Simone Zaccaria
TRACERx Consortium
Mariam Jamal-Hanjani
Nicholas McGranahan & Charles Swanton

July 04, 2024

Lung cancer is the leading cause of cancer-associated mortality worldwide1. Here we analysed 1,644 tumour regions sampled at surgery or during follow-up from the first 421 patients with non-small cell lung cancer prospectively enrolled into the TRACERx study. This project aims to decipher lung cancer evolution and address the primary study endpoint: determining the relationship between intratumour heterogeneity and clinical outcome. In lung adenocarcinoma, mutations in 22 out of 40 common cancer genes were under significant subclonal selection, including classical tumour initiators such as TP53 and KRAS. We defined evolutionary dependencies between drivers, mutational processes and whole genome doubling (WGD) events. Despite patients having a history of smoking, 8% of lung adenocarcinomas lacked evidence of tobacco-induced mutagenesis. These tumours also had similar detection rates for EGFR mutations and for RETROS1ALK and MET oncogenic isoforms compared with tumours in never-smokers, which suggests that they have a similar aetiology and pathogenesis. Large subclonal expansions were associated with positive subclonal selection. Patients with tumours harbouring recent subclonal expansions, on the terminus of a phylogenetic branch, had significantly shorter disease-free survival. Subclonal WGD was detected in 19% of tumours, and 10% of tumours harboured multiple subclonal WGDs in parallel. Subclonal, but not truncal, WGD was associated with shorter disease-free survival. Copy number heterogeneity was associated with extrathoracic relapse within 1 year after surgery. These data demonstrate the importance of clonal expansion, WGD and copy number instability in determining the timing and patterns of relapse in non-small cell lung cancer and provide a comprehensive clinical cancer evolutionary data resource.